Publications

Publications

Microbiome signatures of virulence in the oral-gut-brain axis influence Parkinson's disease and cognitive decline pathophysiology.
Research Paper

Microbiome signatures of virulence in the oral-gut-brain axis influence Parkinson's disease and cognitive decline pathophysiology.

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From dysbiosis to therapy: shared gut microbial signatures and targeted interventions across liver, heart and brain disorders
Review

From dysbiosis to therapy: shared gut microbial signatures and targeted interventions across liver, heart and brain disorders

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Gut microbiota alterations across REM sleep behavior disorder and Parkinson's disease: a machine learning-based meta-analysis
Preprint

Gut microbiota alterations across REM sleep behavior disorder and Parkinson's disease: a machine learning-based meta-analysis

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MetaPepticon: automated prediction of anticancer peptides from microbial genomes and metagenomes
Preprint

MetaPepticon: automated prediction of anticancer peptides from microbial genomes and metagenomes

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Construction of protein sequence databases for metaproteomics: A review of the current tools and databases.
Review

Construction of protein sequence databases for metaproteomics: A review of the current tools and databases.

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gNOMO2: a comprehensive and modular pipeline for integrated multi-omics analyses of microbiomes.
Research Paper

gNOMO2: a comprehensive and modular pipeline for integrated multi-omics analyses of microbiomes.

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Investigation of the relationship between Akkermansia genomic diversity in gut microbiota and Parkinson's disease dementia
Research Paper

Investigation of the relationship between Akkermansia genomic diversity in gut microbiota and Parkinson's disease dementia

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Metaproteogenomic analysis of saliva samples from Parkinson's disease patients with cognitive impairment.
Research Paper

Metaproteogenomic analysis of saliva samples from Parkinson's disease patients with cognitive impairment.

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Integrated multi-omics analyses of microbial communities: A review of the current state and future directions.
Review

Integrated multi-omics analyses of microbial communities: A review of the current state and future directions.

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An in silico investigation of anticancer peptide candidates in fermented food microbiomes
Research Paper

An in silico investigation of anticancer peptide candidates in fermented food microbiomes

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Comparison of S gene mutations in patients with occult and chronic hepatitis B virus infection
Research Paper

Comparison of S gene mutations in patients with occult and chronic hepatitis B virus infection

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Stratification of the Gut Microbiota Composition Landscape across the Alzheimer's Disease Continuum in a Turkish Cohort
Research Paper

Stratification of the Gut Microbiota Composition Landscape across the Alzheimer's Disease Continuum in a Turkish Cohort

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